com.dumontierlab.pdb2rdf.parser.vocabulary.uri
Enum Bio2RdfPdbUriPattern

java.lang.Object
  java.lang.Enum<Bio2RdfPdbUriPattern>
      com.dumontierlab.pdb2rdf.parser.vocabulary.uri.Bio2RdfPdbUriPattern

All Implemented Interfaces:

UriPattern, java.io.Serializable, java.lang.Comparable<Bio2RdfPdbUriPattern>

public enum Bio2RdfPdbUriPattern
extends java.lang.Enum<Bio2RdfPdbUriPattern>
implements UriPattern

Author:

Alexander De Leon

Enum Constant Summary

ABSORPTION_CORRECTION

ABSORT_COEFFICIENT_MU

ABSORT_CORRECTION_T_MAX

ABSORT_CORRECTION_T_MIN

ABSTRACT

AMERICAN_TYPE_CULTURE_COLLECTION

ANGLE_ALPHA

ANGLE_BETA

ANGLE_GAMMA

ANISO_B11

ANISO_B12

ANISO_B13

ANISO_B22

ANISO_B23

ANISO_B33

ANONYMOUS_NS

ATOM

ATOM_SPATIAL_LOCATION

AUTHOR

AUTHOR_NAME

AVERAGE_CONSTRAINT_VIOLATIONS_PER_RESIDUE

AVERAGE_CONSTRAINTS_PER_RESIDUE

AVERAGE_DISTANCE_CONSTRAINT_VIOLATION

AVERAGE_TORSION_ANGLE_CONSTRAINT_VIOLATION

B_ISO_MAX

B_ISO_MEAN

B_ISO_MIN

B_ISO_OR_EQUIVALENT

BOOK

BOOK_TITLE

CANONICAL_POLYMER_SEQUENCE

CARTN_X

CARTN_Y

CARTN_Z

CELL

CELL_LINE

CELL_TYPE

CELLULAR_LOCATION

CELLULAR_LOCATION_TYPE

CHAIN

CHAIN_POSITION

CHEMICAL_AMOUNT

CHEMICAL_SUBSTANCE

CHEMICAL_SUBSTANCE_EXTRACTION

CONFORMER_SELECTION_CRITERIA

CONFORMERS_CALCULATED_TOTAL_NUMBER

CONFORMERS_SUBMITTED_TOTAL_NUMBER

COORDINATE

CORRELATION_COEFFICIENT_FO_TO_FC

CORRELATION_COEFFICIENT_FO_TO_FC_FREE

COUNTRY

COUNTRY_NAME

CRYSTAL

CSD

DATA_CUTOFF_HIGH_ABSF

DATA_CUTOFF_HIGH_RMS_ABSF

DATA_CUTOFF_LOW_ABSF

DISTANCE_CONSTRAINT_VIOLATION_METHOD

DOI

DOI_NUMBER

EDGE_A_LENGTH

EDGE_B_LENGTH

EDGE_C_LENGTH

ENSEMBLE

EXPERIMANTAL_FORMULA_WEIGHT

EXPERIMENT

FIRST_PAGE_NUMBER

FOAF_AUTHOR

FORMAL_CHARGE

GENE_SOURCE

GENE_SOURCE_CELL

GENE_SOURCE_CELL_DEV_STAGE

GENE_SOURCE_CELLULAR_LOCATION

GENE_SOURCE_NAME

GENE_SOURCE_ORGAN

GENE_SOURCE_ORGANELLE

GENE_SOURCE_ORGANISM

GENE_SOURCE_ORGANISM_DEV_STAGE

GENE_SOURCE_ORGANISM_NAME

GENE_SOURCE_PLASMID

GENE_SOURCE_PLASMID_NAME

GENE_SOURCE_TISSUE

GENE_SOURCE_TISSUE_FRACTION

HELIX_LENGTH

HOST_GENE

ISBN_ID

ISOTROPIC_THERMAL_MODEL

ISSN

JOURNAL

JOURNAL_ABBREVIATION

JOURNAL_NAME

JOURNAL_VOLUME

LANGUAGE

LANGUAGE_NAME

LAST_PAGE_NUMBER

LS_CROSS_VALID_METHOD

LS_D_RES_HIGH

LS_D_RES_LOW

LS_NUMBER_PARAMETERS

LS_NUMBER_REFLNS_ALL

LS_NUMBER_REFLNS_OBS

LS_NUMBER_REFLNS_R_FREE

LS_NUMBER_RESTRAINTS

LS_PERCENT_REFLNS_OBS

LS_PERCENT_REFLNS_R_FREE

LS_R_FACTOR_ALL

LS_R_FACTOR_OBS

LS_R_FACTOR_R_FREE

LS_R_FACTOR_R_FREE_ERROR

LS_R_FACTOR_R_FREE_ERROR_DETAILS

LS_R_FACTOR_R_WORK

LS_REDUNDANCY_REFLNS_OBS

LS_SIGMA_F

LS_SIGMA_I

LS_WR_FACTOR_R_FREE

LS_WR_FACTOR_R_WORK

MAXIMUM_DISTANCE_CONSTRAINT_VIOLATION

MAXIMUM_LOWER_DISTANCE_CONSTRAINT_VIOLATION

MAXIMUM_UPPER_DISTANCE_CONSTRAINT_VIOLATION

MAXIUM_TORSION_ANGLE_CONSTRAINT_VIOLATION

MEDLINE

MEDLINE_ID

METHOD_TO_DETERMINE_STRUCT

MODEL

NCBI_TAXONOMY

NUMBER_OF_MONOMERS

OCCUPANCY

OCCUPANCY_MAX

OCCUPANCY_MIN

ORGAN

ORGAN_TYPE

ORGANELLE

ORGANELLE_TYPE

ORGANISM

ORGANISM_NAME

OVERALL_ESU_R

OVERALL_ESU_R_Free

OVERALL_FOM_FREE_R_SET

OVERALL_FOM_WORK_R_SET

OVERALL_PHASE_ERROR

OVERALL_SU_B

OVERALL_SU_ML

OVERALL_SU_R_CRUICKSHANK_DPI

OVERALL_SU_R_FREE

PDB_GRAPH

PDB_RECORD

PLASMID

PLASMID_ID

POLYMER_SEQUENCE

PUBLICATION

PUBLICATION_TITLE

PUBLICATION_YEAR

PUBLISHER

PUBLISHER_NAME

PUBMED

PUBMED_ID

R_FREE_SELECTION_DETAILS

RECIPROCAL_ANGLE_ALPHA

RECIPROCAL_ANGLE_BETA

RECIPROCAL_ANGLE_GAMMA

RECIPROCAL_EDGE_A_LENGTH

RECIPROCAL_EDGE_B_LENGTH

RECIPROCAL_EDGE_C_LENGTH

REFINEMENT

REFINEMENT_DETAILS

REFINEMENT_METHOD

REPRESENTATIVE_CONFORMER

RESIDUE

RESIDUE_FORMULA

RESIDUE_FORMULA_WEIGH

RESIDUE_NUMBER_OF_ATOMS

RESIDUE_NUMBER_OF_NON_HYDROGEN_ATOMS

RESIDUE_TYPE

SECONDARY_STRUCTURE

SECRETION

SECRETION_TYPE

SOLVENT_ION_PROBE_RADII

SOLVENT_MODEL_DETAILS

SOLVENT_MODEL_PARAM_BSOL

SOLVENT_MODEL_PARAM_KSOL

SOLVENT_SHRINKAGE_RADII

SOLVENT_VDW_PROBE_RADII

STARTING_MODEL

STEREOCHEM_TARGET_VAL_SPEC_CASE

STEREOCHEMISTRY_TARGET_VALUES

STRUCTURE_DETERMINATION

TARGET_DB

THEORETICAL_FORMULA_WEIGHT

TISSUE

TISSUE_FRACTION

TISSUE_FRACTION_TYPE

TISSUE_TYPE

TORSION_ANGLE_CONSTRAINT_VIOLATION_METHOD

UNIT_CELL

UNIT_CELL_VOLUME

VECTOR

VOLUME_NUMBER

Field Summary

static java.lang.String

DEFAULT_NAMESPACE

Method Summary

java.lang.String	getPattern()
static Bio2RdfPdbUriPattern	valueOf(java.lang.String name) Returns the enum constant of this type with the specified name.
static Bio2RdfPdbUriPattern[]	values() Returns an array containing the constants of this enum type, in the order they are declared.

Methods inherited from class java.lang.Enum

clone, compareTo, equals, finalize, getDeclaringClass, hashCode, name, ordinal, toString, valueOf

Methods inherited from class java.lang.Object

getClass, notify, notifyAll, wait, wait, wait

Enum Constant Detail

PDB_RECORD

public static final Bio2RdfPdbUriPattern PDB_RECORD

ANONYMOUS_NS

public static final Bio2RdfPdbUriPattern ANONYMOUS_NS

EXPERIMENT

public static final Bio2RdfPdbUriPattern EXPERIMENT

CHEMICAL_SUBSTANCE

public static final Bio2RdfPdbUriPattern CHEMICAL_SUBSTANCE

STRUCTURE_DETERMINATION

public static final Bio2RdfPdbUriPattern STRUCTURE_DETERMINATION

CHEMICAL_SUBSTANCE_EXTRACTION

public static final Bio2RdfPdbUriPattern CHEMICAL_SUBSTANCE_EXTRACTION

THEORETICAL_FORMULA_WEIGHT

public static final Bio2RdfPdbUriPattern THEORETICAL_FORMULA_WEIGHT

EXPERIMANTAL_FORMULA_WEIGHT

public static final Bio2RdfPdbUriPattern EXPERIMANTAL_FORMULA_WEIGHT

CHEMICAL_AMOUNT

public static final Bio2RdfPdbUriPattern CHEMICAL_AMOUNT

PUBLICATION

public static final Bio2RdfPdbUriPattern PUBLICATION

ABSTRACT

public static final Bio2RdfPdbUriPattern ABSTRACT

BOOK

public static final Bio2RdfPdbUriPattern BOOK

BOOK_TITLE

public static final Bio2RdfPdbUriPattern BOOK_TITLE

PUBLISHER

public static final Bio2RdfPdbUriPattern PUBLISHER

PUBLICATION_TITLE

public static final Bio2RdfPdbUriPattern PUBLICATION_TITLE

COUNTRY

public static final Bio2RdfPdbUriPattern COUNTRY

COUNTRY_NAME

public static final Bio2RdfPdbUriPattern COUNTRY_NAME

CSD

public static final Bio2RdfPdbUriPattern CSD

MEDLINE

public static final Bio2RdfPdbUriPattern MEDLINE

MEDLINE_ID

public static final Bio2RdfPdbUriPattern MEDLINE_ID

JOURNAL_ABBREVIATION

public static final Bio2RdfPdbUriPattern JOURNAL_ABBREVIATION

JOURNAL_NAME

public static final Bio2RdfPdbUriPattern JOURNAL_NAME

JOURNAL

public static final Bio2RdfPdbUriPattern JOURNAL

ISSN

public static final Bio2RdfPdbUriPattern ISSN

JOURNAL_VOLUME

public static final Bio2RdfPdbUriPattern JOURNAL_VOLUME

VOLUME_NUMBER

public static final Bio2RdfPdbUriPattern VOLUME_NUMBER

ISBN_ID

public static final Bio2RdfPdbUriPattern ISBN_ID

LANGUAGE

public static final Bio2RdfPdbUriPattern LANGUAGE

LANGUAGE_NAME

public static final Bio2RdfPdbUriPattern LANGUAGE_NAME

FIRST_PAGE_NUMBER

public static final Bio2RdfPdbUriPattern FIRST_PAGE_NUMBER

LAST_PAGE_NUMBER

public static final Bio2RdfPdbUriPattern LAST_PAGE_NUMBER

DOI

public static final Bio2RdfPdbUriPattern DOI

DOI_NUMBER

public static final Bio2RdfPdbUriPattern DOI_NUMBER

PUBMED

public static final Bio2RdfPdbUriPattern PUBMED

PUBMED_ID

public static final Bio2RdfPdbUriPattern PUBMED_ID

PUBLICATION_YEAR

public static final Bio2RdfPdbUriPattern PUBLICATION_YEAR

AUTHOR

public static final Bio2RdfPdbUriPattern AUTHOR

AUTHOR_NAME

public static final Bio2RdfPdbUriPattern AUTHOR_NAME

FOAF_AUTHOR

public static final Bio2RdfPdbUriPattern FOAF_AUTHOR

NUMBER_OF_MONOMERS

public static final Bio2RdfPdbUriPattern NUMBER_OF_MONOMERS

POLYMER_SEQUENCE

public static final Bio2RdfPdbUriPattern POLYMER_SEQUENCE

CANONICAL_POLYMER_SEQUENCE

public static final Bio2RdfPdbUriPattern CANONICAL_POLYMER_SEQUENCE

TARGET_DB

public static final Bio2RdfPdbUriPattern TARGET_DB

CELL

public static final Bio2RdfPdbUriPattern CELL

CELL_TYPE

public static final Bio2RdfPdbUriPattern CELL_TYPE

CELL_LINE

public static final Bio2RdfPdbUriPattern CELL_LINE

NCBI_TAXONOMY

public static final Bio2RdfPdbUriPattern NCBI_TAXONOMY

ORGANISM

public static final Bio2RdfPdbUriPattern ORGANISM

ORGAN

public static final Bio2RdfPdbUriPattern ORGAN

ORGAN_TYPE

public static final Bio2RdfPdbUriPattern ORGAN_TYPE

ORGANELLE

public static final Bio2RdfPdbUriPattern ORGANELLE

ORGANELLE_TYPE

public static final Bio2RdfPdbUriPattern ORGANELLE_TYPE

ORGANISM_NAME

public static final Bio2RdfPdbUriPattern ORGANISM_NAME

PLASMID

public static final Bio2RdfPdbUriPattern PLASMID

PLASMID_ID

public static final Bio2RdfPdbUriPattern PLASMID_ID

SECRETION

public static final Bio2RdfPdbUriPattern SECRETION

SECRETION_TYPE

public static final Bio2RdfPdbUriPattern SECRETION_TYPE

TISSUE

public static final Bio2RdfPdbUriPattern TISSUE

TISSUE_TYPE

public static final Bio2RdfPdbUriPattern TISSUE_TYPE

TISSUE_FRACTION

public static final Bio2RdfPdbUriPattern TISSUE_FRACTION

TISSUE_FRACTION_TYPE

public static final Bio2RdfPdbUriPattern TISSUE_FRACTION_TYPE

ATOM

public static final Bio2RdfPdbUriPattern ATOM

MODEL

public static final Bio2RdfPdbUriPattern MODEL

ATOM_SPATIAL_LOCATION

public static final Bio2RdfPdbUriPattern ATOM_SPATIAL_LOCATION

GENE_SOURCE

public static final Bio2RdfPdbUriPattern GENE_SOURCE

GENE_SOURCE_ORGANISM

public static final Bio2RdfPdbUriPattern GENE_SOURCE_ORGANISM

B_ISO_OR_EQUIVALENT

public static final Bio2RdfPdbUriPattern B_ISO_OR_EQUIVALENT

CARTN_X

public static final Bio2RdfPdbUriPattern CARTN_X

CARTN_Y

public static final Bio2RdfPdbUriPattern CARTN_Y

CARTN_Z

public static final Bio2RdfPdbUriPattern CARTN_Z

OCCUPANCY

public static final Bio2RdfPdbUriPattern OCCUPANCY

FORMAL_CHARGE

public static final Bio2RdfPdbUriPattern FORMAL_CHARGE

VECTOR

public static final Bio2RdfPdbUriPattern VECTOR

GENE_SOURCE_TISSUE

public static final Bio2RdfPdbUriPattern GENE_SOURCE_TISSUE

GENE_SOURCE_TISSUE_FRACTION

public static final Bio2RdfPdbUriPattern GENE_SOURCE_TISSUE_FRACTION

AMERICAN_TYPE_CULTURE_COLLECTION

public static final Bio2RdfPdbUriPattern AMERICAN_TYPE_CULTURE_COLLECTION

GENE_SOURCE_CELL

public static final Bio2RdfPdbUriPattern GENE_SOURCE_CELL

GENE_SOURCE_CELLULAR_LOCATION

public static final Bio2RdfPdbUriPattern GENE_SOURCE_CELLULAR_LOCATION

CELLULAR_LOCATION_TYPE

public static final Bio2RdfPdbUriPattern CELLULAR_LOCATION_TYPE

GENE_SOURCE_NAME

public static final Bio2RdfPdbUriPattern GENE_SOURCE_NAME

GENE_SOURCE_ORGAN

public static final Bio2RdfPdbUriPattern GENE_SOURCE_ORGAN

GENE_SOURCE_ORGANELLE

public static final Bio2RdfPdbUriPattern GENE_SOURCE_ORGANELLE

GENE_SOURCE_PLASMID

public static final Bio2RdfPdbUriPattern GENE_SOURCE_PLASMID

GENE_SOURCE_PLASMID_NAME

public static final Bio2RdfPdbUriPattern GENE_SOURCE_PLASMID_NAME

GENE_SOURCE_ORGANISM_NAME

public static final Bio2RdfPdbUriPattern GENE_SOURCE_ORGANISM_NAME

CELLULAR_LOCATION

public static final Bio2RdfPdbUriPattern CELLULAR_LOCATION

HOST_GENE

public static final Bio2RdfPdbUriPattern HOST_GENE

RESIDUE

public static final Bio2RdfPdbUriPattern RESIDUE

CHAIN

public static final Bio2RdfPdbUriPattern CHAIN

CHAIN_POSITION

public static final Bio2RdfPdbUriPattern CHAIN_POSITION

PUBLISHER_NAME

public static final Bio2RdfPdbUriPattern PUBLISHER_NAME

GENE_SOURCE_CELL_DEV_STAGE

public static final Bio2RdfPdbUriPattern GENE_SOURCE_CELL_DEV_STAGE

GENE_SOURCE_ORGANISM_DEV_STAGE

public static final Bio2RdfPdbUriPattern GENE_SOURCE_ORGANISM_DEV_STAGE

RESIDUE_FORMULA_WEIGH

public static final Bio2RdfPdbUriPattern RESIDUE_FORMULA_WEIGH

RESIDUE_TYPE

public static final Bio2RdfPdbUriPattern RESIDUE_TYPE

RESIDUE_NUMBER_OF_ATOMS

public static final Bio2RdfPdbUriPattern RESIDUE_NUMBER_OF_ATOMS

RESIDUE_NUMBER_OF_NON_HYDROGEN_ATOMS

public static final Bio2RdfPdbUriPattern RESIDUE_NUMBER_OF_NON_HYDROGEN_ATOMS

RESIDUE_FORMULA

public static final Bio2RdfPdbUriPattern RESIDUE_FORMULA

PDB_GRAPH

public static final Bio2RdfPdbUriPattern PDB_GRAPH

SECONDARY_STRUCTURE

public static final Bio2RdfPdbUriPattern SECONDARY_STRUCTURE

HELIX_LENGTH

public static final Bio2RdfPdbUriPattern HELIX_LENGTH

CRYSTAL

public static final Bio2RdfPdbUriPattern CRYSTAL

UNIT_CELL

public static final Bio2RdfPdbUriPattern UNIT_CELL

ANGLE_ALPHA

public static final Bio2RdfPdbUriPattern ANGLE_ALPHA

ANGLE_BETA

public static final Bio2RdfPdbUriPattern ANGLE_BETA

ANGLE_GAMMA

public static final Bio2RdfPdbUriPattern ANGLE_GAMMA

EDGE_A_LENGTH

public static final Bio2RdfPdbUriPattern EDGE_A_LENGTH

EDGE_B_LENGTH

public static final Bio2RdfPdbUriPattern EDGE_B_LENGTH

EDGE_C_LENGTH

public static final Bio2RdfPdbUriPattern EDGE_C_LENGTH

RECIPROCAL_ANGLE_ALPHA

public static final Bio2RdfPdbUriPattern RECIPROCAL_ANGLE_ALPHA

RECIPROCAL_ANGLE_GAMMA

public static final Bio2RdfPdbUriPattern RECIPROCAL_ANGLE_GAMMA

RECIPROCAL_ANGLE_BETA

public static final Bio2RdfPdbUriPattern RECIPROCAL_ANGLE_BETA

RECIPROCAL_EDGE_A_LENGTH

public static final Bio2RdfPdbUriPattern RECIPROCAL_EDGE_A_LENGTH

RECIPROCAL_EDGE_B_LENGTH

public static final Bio2RdfPdbUriPattern RECIPROCAL_EDGE_B_LENGTH

RECIPROCAL_EDGE_C_LENGTH

public static final Bio2RdfPdbUriPattern RECIPROCAL_EDGE_C_LENGTH

UNIT_CELL_VOLUME

public static final Bio2RdfPdbUriPattern UNIT_CELL_VOLUME

ABSORPTION_CORRECTION

public static final Bio2RdfPdbUriPattern ABSORPTION_CORRECTION

ABSORT_COEFFICIENT_MU

public static final Bio2RdfPdbUriPattern ABSORT_COEFFICIENT_MU

ABSORT_CORRECTION_T_MAX

public static final Bio2RdfPdbUriPattern ABSORT_CORRECTION_T_MAX

ABSORT_CORRECTION_T_MIN

public static final Bio2RdfPdbUriPattern ABSORT_CORRECTION_T_MIN

REFINEMENT

public static final Bio2RdfPdbUriPattern REFINEMENT

B_ISO_MEAN

public static final Bio2RdfPdbUriPattern B_ISO_MEAN

B_ISO_MAX

public static final Bio2RdfPdbUriPattern B_ISO_MAX

B_ISO_MIN

public static final Bio2RdfPdbUriPattern B_ISO_MIN

ANISO_B11

public static final Bio2RdfPdbUriPattern ANISO_B11

ANISO_B12

public static final Bio2RdfPdbUriPattern ANISO_B12

ANISO_B13

public static final Bio2RdfPdbUriPattern ANISO_B13

ANISO_B22

public static final Bio2RdfPdbUriPattern ANISO_B22

ANISO_B23

public static final Bio2RdfPdbUriPattern ANISO_B23

ANISO_B33

public static final Bio2RdfPdbUriPattern ANISO_B33

CORRELATION_COEFFICIENT_FO_TO_FC

public static final Bio2RdfPdbUriPattern CORRELATION_COEFFICIENT_FO_TO_FC

CORRELATION_COEFFICIENT_FO_TO_FC_FREE

public static final Bio2RdfPdbUriPattern CORRELATION_COEFFICIENT_FO_TO_FC_FREE

REFINEMENT_DETAILS

public static final Bio2RdfPdbUriPattern REFINEMENT_DETAILS

REFINEMENT_METHOD

public static final Bio2RdfPdbUriPattern REFINEMENT_METHOD

LS_R_FACTOR_R_FREE

public static final Bio2RdfPdbUriPattern LS_R_FACTOR_R_FREE

LS_R_FACTOR_R_FREE_ERROR

public static final Bio2RdfPdbUriPattern LS_R_FACTOR_R_FREE_ERROR

LS_R_FACTOR_R_FREE_ERROR_DETAILS

public static final Bio2RdfPdbUriPattern LS_R_FACTOR_R_FREE_ERROR_DETAILS

LS_R_FACTOR_R_WORK

public static final Bio2RdfPdbUriPattern LS_R_FACTOR_R_WORK

LS_R_FACTOR_ALL

public static final Bio2RdfPdbUriPattern LS_R_FACTOR_ALL

LS_R_FACTOR_OBS

public static final Bio2RdfPdbUriPattern LS_R_FACTOR_OBS

LS_D_RES_HIGH

public static final Bio2RdfPdbUriPattern LS_D_RES_HIGH

LS_D_RES_LOW

public static final Bio2RdfPdbUriPattern LS_D_RES_LOW

LS_NUMBER_PARAMETERS

public static final Bio2RdfPdbUriPattern LS_NUMBER_PARAMETERS

LS_NUMBER_REFLNS_R_FREE

public static final Bio2RdfPdbUriPattern LS_NUMBER_REFLNS_R_FREE

LS_NUMBER_REFLNS_ALL

public static final Bio2RdfPdbUriPattern LS_NUMBER_REFLNS_ALL

LS_NUMBER_REFLNS_OBS

public static final Bio2RdfPdbUriPattern LS_NUMBER_REFLNS_OBS

LS_NUMBER_RESTRAINTS

public static final Bio2RdfPdbUriPattern LS_NUMBER_RESTRAINTS

LS_PERCENT_REFLNS_R_FREE

public static final Bio2RdfPdbUriPattern LS_PERCENT_REFLNS_R_FREE

LS_PERCENT_REFLNS_OBS

public static final Bio2RdfPdbUriPattern LS_PERCENT_REFLNS_OBS

LS_REDUNDANCY_REFLNS_OBS

public static final Bio2RdfPdbUriPattern LS_REDUNDANCY_REFLNS_OBS

LS_WR_FACTOR_R_FREE

public static final Bio2RdfPdbUriPattern LS_WR_FACTOR_R_FREE

LS_WR_FACTOR_R_WORK

public static final Bio2RdfPdbUriPattern LS_WR_FACTOR_R_WORK

OCCUPANCY_MAX

public static final Bio2RdfPdbUriPattern OCCUPANCY_MAX

OCCUPANCY_MIN

public static final Bio2RdfPdbUriPattern OCCUPANCY_MIN

OVERALL_FOM_FREE_R_SET

public static final Bio2RdfPdbUriPattern OVERALL_FOM_FREE_R_SET

OVERALL_FOM_WORK_R_SET

public static final Bio2RdfPdbUriPattern OVERALL_FOM_WORK_R_SET

OVERALL_SU_B

public static final Bio2RdfPdbUriPattern OVERALL_SU_B

OVERALL_SU_ML

public static final Bio2RdfPdbUriPattern OVERALL_SU_ML

OVERALL_SU_R_CRUICKSHANK_DPI

public static final Bio2RdfPdbUriPattern OVERALL_SU_R_CRUICKSHANK_DPI

OVERALL_SU_R_FREE

public static final Bio2RdfPdbUriPattern OVERALL_SU_R_FREE

R_FREE_SELECTION_DETAILS

public static final Bio2RdfPdbUriPattern R_FREE_SELECTION_DETAILS

DATA_CUTOFF_HIGH_ABSF

public static final Bio2RdfPdbUriPattern DATA_CUTOFF_HIGH_ABSF

DATA_CUTOFF_HIGH_RMS_ABSF

public static final Bio2RdfPdbUriPattern DATA_CUTOFF_HIGH_RMS_ABSF

DATA_CUTOFF_LOW_ABSF

public static final Bio2RdfPdbUriPattern DATA_CUTOFF_LOW_ABSF

ISOTROPIC_THERMAL_MODEL

public static final Bio2RdfPdbUriPattern ISOTROPIC_THERMAL_MODEL

LS_CROSS_VALID_METHOD

public static final Bio2RdfPdbUriPattern LS_CROSS_VALID_METHOD

LS_SIGMA_F

public static final Bio2RdfPdbUriPattern LS_SIGMA_F

LS_SIGMA_I

public static final Bio2RdfPdbUriPattern LS_SIGMA_I

METHOD_TO_DETERMINE_STRUCT

public static final Bio2RdfPdbUriPattern METHOD_TO_DETERMINE_STRUCT

OVERALL_ESU_R

public static final Bio2RdfPdbUriPattern OVERALL_ESU_R

OVERALL_ESU_R_Free

public static final Bio2RdfPdbUriPattern OVERALL_ESU_R_Free

OVERALL_PHASE_ERROR

public static final Bio2RdfPdbUriPattern OVERALL_PHASE_ERROR

SOLVENT_ION_PROBE_RADII

public static final Bio2RdfPdbUriPattern SOLVENT_ION_PROBE_RADII

SOLVENT_SHRINKAGE_RADII

public static final Bio2RdfPdbUriPattern SOLVENT_SHRINKAGE_RADII

SOLVENT_VDW_PROBE_RADII

public static final Bio2RdfPdbUriPattern SOLVENT_VDW_PROBE_RADII

STARTING_MODEL

public static final Bio2RdfPdbUriPattern STARTING_MODEL

STEREOCHEM_TARGET_VAL_SPEC_CASE

public static final Bio2RdfPdbUriPattern STEREOCHEM_TARGET_VAL_SPEC_CASE

STEREOCHEMISTRY_TARGET_VALUES

public static final Bio2RdfPdbUriPattern STEREOCHEMISTRY_TARGET_VALUES

SOLVENT_MODEL_DETAILS

public static final Bio2RdfPdbUriPattern SOLVENT_MODEL_DETAILS

SOLVENT_MODEL_PARAM_BSOL

public static final Bio2RdfPdbUriPattern SOLVENT_MODEL_PARAM_BSOL

SOLVENT_MODEL_PARAM_KSOL

public static final Bio2RdfPdbUriPattern SOLVENT_MODEL_PARAM_KSOL

ENSEMBLE

public static final Bio2RdfPdbUriPattern ENSEMBLE

AVERAGE_CONSTRAINT_VIOLATIONS_PER_RESIDUE

public static final Bio2RdfPdbUriPattern AVERAGE_CONSTRAINT_VIOLATIONS_PER_RESIDUE

AVERAGE_CONSTRAINTS_PER_RESIDUE

public static final Bio2RdfPdbUriPattern AVERAGE_CONSTRAINTS_PER_RESIDUE

AVERAGE_DISTANCE_CONSTRAINT_VIOLATION

public static final Bio2RdfPdbUriPattern AVERAGE_DISTANCE_CONSTRAINT_VIOLATION

AVERAGE_TORSION_ANGLE_CONSTRAINT_VIOLATION

public static final Bio2RdfPdbUriPattern AVERAGE_TORSION_ANGLE_CONSTRAINT_VIOLATION

CONFORMER_SELECTION_CRITERIA

public static final Bio2RdfPdbUriPattern CONFORMER_SELECTION_CRITERIA

CONFORMERS_CALCULATED_TOTAL_NUMBER

public static final Bio2RdfPdbUriPattern CONFORMERS_CALCULATED_TOTAL_NUMBER

CONFORMERS_SUBMITTED_TOTAL_NUMBER

public static final Bio2RdfPdbUriPattern CONFORMERS_SUBMITTED_TOTAL_NUMBER

DISTANCE_CONSTRAINT_VIOLATION_METHOD

public static final Bio2RdfPdbUriPattern DISTANCE_CONSTRAINT_VIOLATION_METHOD

MAXIMUM_DISTANCE_CONSTRAINT_VIOLATION

public static final Bio2RdfPdbUriPattern MAXIMUM_DISTANCE_CONSTRAINT_VIOLATION

MAXIMUM_LOWER_DISTANCE_CONSTRAINT_VIOLATION

public static final Bio2RdfPdbUriPattern MAXIMUM_LOWER_DISTANCE_CONSTRAINT_VIOLATION

MAXIUM_TORSION_ANGLE_CONSTRAINT_VIOLATION

public static final Bio2RdfPdbUriPattern MAXIUM_TORSION_ANGLE_CONSTRAINT_VIOLATION

MAXIMUM_UPPER_DISTANCE_CONSTRAINT_VIOLATION

public static final Bio2RdfPdbUriPattern MAXIMUM_UPPER_DISTANCE_CONSTRAINT_VIOLATION

REPRESENTATIVE_CONFORMER

public static final Bio2RdfPdbUriPattern REPRESENTATIVE_CONFORMER

TORSION_ANGLE_CONSTRAINT_VIOLATION_METHOD

public static final Bio2RdfPdbUriPattern TORSION_ANGLE_CONSTRAINT_VIOLATION_METHOD

COORDINATE

public static final Bio2RdfPdbUriPattern COORDINATE

Field Detail

DEFAULT_NAMESPACE

public static final java.lang.String DEFAULT_NAMESPACE

See Also:

Constant Field Values

Method Detail

values

public static Bio2RdfPdbUriPattern[] values()

Returns an array containing the constants of this enum type, in the order they are declared. This method may be used to iterate over the constants as follows:

for (Bio2RdfPdbUriPattern c : Bio2RdfPdbUriPattern.values())
    System.out.println(c);

Returns:

an array containing the constants of this enum type, in the order they are declared

valueOf

public static Bio2RdfPdbUriPattern valueOf(java.lang.String name)

Returns the enum constant of this type with the specified name. The string must match exactly an identifier used to declare an enum constant in this type. (Extraneous whitespace characters are not permitted.)

Parameters:

name - the name of the enum constant to be returned.

Returns:

the enum constant with the specified name

Throws:

java.lang.IllegalArgumentException - if this enum type has no constant with the specified name

java.lang.NullPointerException - if the argument is null

getPattern

public java.lang.String getPattern()

Specified by:

getPattern in interface UriPattern