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A

add(String, List<String>) - Method in class com.clarkparsia.pellint.rdfxml.RDFLints
 
add(RDFModel) - Method in class com.clarkparsia.pellint.rdfxml.RDFModel
 
add(Model) - Method in class com.clarkparsia.pellint.rdfxml.RDFModel
 
addAllParticipatingAxioms(Collection<? extends OWLClassAxiom>) - Method in class com.clarkparsia.pellint.model.Lint
 
addAllParticipatingClasses(Collection<? extends OWLClass>) - Method in class com.clarkparsia.pellint.model.Lint
 
addAllStatements(Iterator<Statement>) - Method in class com.clarkparsia.pellint.rdfxml.RDFModel
 
addAllStatements(List<Statement>) - Method in class com.clarkparsia.pellint.rdfxml.RDFModel
 
addAllStatementsWithExistingBNodesOnly(List<Statement>) - Method in class com.clarkparsia.pellint.rdfxml.RDFModel
 
addAnnotationRole(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
addAntiSymmetricRole(Resource) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
addClass(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
addComment(String) - Method in class com.clarkparsia.pellint.rdfxml.RDFModel
 
addDatatype(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
addDatatypeRole(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
addDefinite(E) - Method in class com.clarkparsia.pellint.rdfxml.DoubtfulSet
 
addEdge(V, V) - Method in class com.clarkparsia.pellint.util.OptimizedDirectedMultigraph
 
addEdge(V, V, int) - Method in class com.clarkparsia.pellint.util.OptimizedDirectedMultigraph
 
addIndividual(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
addInverseFunctionalRole(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
addIrreflexiveRole(Resource) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
addLint(LintPattern, Lint) - Method in class com.clarkparsia.pellint.model.OntologyLints
 
addLints(LintPattern, List<Lint>) - Method in class com.clarkparsia.pellint.model.OntologyLints
 
addLiteral(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
addLiteralAsClass(Literal) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
addLiteralAsIndividual(Literal) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
addMissingStatements(List<Statement>) - Method in class com.clarkparsia.pellint.rdfxml.RDFLints
 
addNamespace(String, String) - Method in class com.clarkparsia.pellint.rdfxml.RDFModel
 
addObjectRole(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
addOntology(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
addOntologyRole(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
addParticipatingAxiom(OWLClassAxiom) - Method in class com.clarkparsia.pellint.model.Lint
 
addParticipatingClass(OWLClass) - Method in class com.clarkparsia.pellint.model.Lint
 
addRDFSClass(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
addReflexiveRole(Resource) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
addResourcesAsLiteral(Resource) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
addRestriction(Resource) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
addStatement(Statement) - Method in class com.clarkparsia.pellint.rdfxml.RDFModel
 
addSWRLVariable(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
addSymmetricRole(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
addTransitiveRole(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
addUntypedRole(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
apply(OWLOntologyManager, OWLOntology) - Method in class com.clarkparsia.pellint.model.LintFixer
Replace the detected OWLAxioms with a new set of OWLAxioms, and apply the change to the given OWLOntology using the given OWLOntologyManager.
applyFix(OWLOntologyManager) - Method in class com.clarkparsia.pellint.model.Lint
Apply LintFixer to the source OWLOntology where this Lint was found, using the given OWLOntologyManager.
applyFix(OWLOntologyManager) - Method in class com.clarkparsia.pellint.model.OntologyLints
Fix all reparable lints.
asSet(T...) - Static method in class com.clarkparsia.pellint.util.CollectionUtil
 
assumeAnnotationRole(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
assumeClass(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
assumeDatatype(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
assumeDatatypeRole(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
assumeIndividual(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
assumeObjectRole(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
assumeOntology(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
assumeSWRLVariable(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
AxiomLintPattern - Class in com.clarkparsia.pellint.lintpattern.axiom
Title: Axiom-based Lint Pattern Abstract Class
AxiomLintPattern() - Constructor for class com.clarkparsia.pellint.lintpattern.axiom.AxiomLintPattern
 

C

clear() - Method in class com.clarkparsia.pellint.rdfxml.DoubtfulSet
 
CollectionUtil - Class in com.clarkparsia.pellint.util
Title: Collection Utilities
CollectionUtil() - Constructor for class com.clarkparsia.pellint.util.CollectionUtil
 
com.clarkparsia.pellint.format - package com.clarkparsia.pellint.format
 
com.clarkparsia.pellint.lintpattern - package com.clarkparsia.pellint.lintpattern
 
com.clarkparsia.pellint.lintpattern.axiom - package com.clarkparsia.pellint.lintpattern.axiom
 
com.clarkparsia.pellint.lintpattern.ontology - package com.clarkparsia.pellint.lintpattern.ontology
 
com.clarkparsia.pellint.model - package com.clarkparsia.pellint.model
 
com.clarkparsia.pellint.rdfxml - package com.clarkparsia.pellint.rdfxml
 
com.clarkparsia.pellint.util - package com.clarkparsia.pellint.util
 
CompactClassLintFormat - Class in com.clarkparsia.pellint.format
Title: Compact Class Lint Format
CompactClassLintFormat() - Constructor for class com.clarkparsia.pellint.format.CompactClassLintFormat
 
compareTo(Severity) - Method in class com.clarkparsia.pellint.model.Severity
 
containsAnnotaionRole(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
containsClass(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
containsDatatype(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
containsDatatypeRole(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
containsDefinite(E) - Method in class com.clarkparsia.pellint.rdfxml.DoubtfulSet
 
containsIndividual(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
containsObjectRole(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
containsOntology(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
containsOntologyRole(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
containsResource(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
containsRole(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
containsStatement(Resource, Property, RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.RDFModel
 
containsSWRLVariable(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
copy(List<? extends T>) - Static method in class com.clarkparsia.pellint.util.CollectionUtil
 
copy(Set<? extends T>) - Static method in class com.clarkparsia.pellint.util.CollectionUtil
 

D

DEFAULT_AXIOM_LINT_PATTERNS - Static variable in class com.clarkparsia.pellint.lintpattern.LintPatternLoader
 
DEFAULT_ONTOLOGY_LINT_PATTERNS - Static variable in class com.clarkparsia.pellint.lintpattern.LintPatternLoader
 
doubleValue() - Method in class com.clarkparsia.pellint.model.Severity
 
DoubtfulSet<E> - Class in com.clarkparsia.pellint.rdfxml
Title:
DoubtfulSet() - Constructor for class com.clarkparsia.pellint.rdfxml.DoubtfulSet
 

E

equals(Object) - Method in class com.clarkparsia.pellint.model.Severity
 
EquivalentAndSubclassAxiomPattern - Class in com.clarkparsia.pellint.lintpattern.ontology
Title:
EquivalentAndSubclassAxiomPattern() - Constructor for class com.clarkparsia.pellint.lintpattern.ontology.EquivalentAndSubclassAxiomPattern
 
EquivalentToAllValuePattern - Class in com.clarkparsia.pellint.lintpattern.axiom
Title:
EquivalentToAllValuePattern() - Constructor for class com.clarkparsia.pellint.lintpattern.axiom.EquivalentToAllValuePattern
 
EquivalentToComplementPattern - Class in com.clarkparsia.pellint.lintpattern.axiom
Title:
EquivalentToComplementPattern() - Constructor for class com.clarkparsia.pellint.lintpattern.axiom.EquivalentToComplementPattern
 
EquivalentToMaxCardinalityPattern - Class in com.clarkparsia.pellint.lintpattern.axiom
Title:
EquivalentToMaxCardinalityPattern() - Constructor for class com.clarkparsia.pellint.lintpattern.axiom.EquivalentToMaxCardinalityPattern
 
EquivalentToTopPattern - Class in com.clarkparsia.pellint.lintpattern.axiom
Title:
EquivalentToTopPattern() - Constructor for class com.clarkparsia.pellint.lintpattern.axiom.EquivalentToTopPattern
 
ExistentialExplosionPattern - Class in com.clarkparsia.pellint.lintpattern.ontology
Title:
ExistentialExplosionPattern() - Constructor for class com.clarkparsia.pellint.lintpattern.ontology.ExistentialExplosionPattern
 

F

format(Lint) - Method in class com.clarkparsia.pellint.format.CompactClassLintFormat
 
format(Lint) - Method in interface com.clarkparsia.pellint.format.LintFormat
 
format(Lint) - Method in class com.clarkparsia.pellint.format.SimpleLintFormat
 

G

GCIPattern - Class in com.clarkparsia.pellint.lintpattern.axiom
Title:
GCIPattern() - Constructor for class com.clarkparsia.pellint.lintpattern.axiom.GCIPattern
 
getAllMultiTypedResources() - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
getAllRDFClasses() - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
getAllRestrictions() - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
getAllTypingStatements() - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
getAxiomLintPatterns() - Method in class com.clarkparsia.pellint.lintpattern.LintPatternLoader
 
getAxiomsToAdd() - Method in class com.clarkparsia.pellint.model.LintFixer
 
getAxiomsToRemove() - Method in class com.clarkparsia.pellint.model.LintFixer
 
getComments() - Method in class com.clarkparsia.pellint.rdfxml.RDFModel
 
getDefaultLintFormat() - Method in class com.clarkparsia.pellint.lintpattern.axiom.EquivalentToAllValuePattern
 
getDefaultLintFormat() - Method in class com.clarkparsia.pellint.lintpattern.axiom.EquivalentToComplementPattern
 
getDefaultLintFormat() - Method in class com.clarkparsia.pellint.lintpattern.axiom.EquivalentToMaxCardinalityPattern
 
getDefaultLintFormat() - Method in class com.clarkparsia.pellint.lintpattern.axiom.EquivalentToTopPattern
 
getDefaultLintFormat() - Method in class com.clarkparsia.pellint.lintpattern.axiom.GCIPattern
 
getDefaultLintFormat() - Method in class com.clarkparsia.pellint.lintpattern.axiom.LargeCardinalityPattern
 
getDefaultLintFormat() - Method in class com.clarkparsia.pellint.lintpattern.axiom.LargeDisjunctionPattern
 
getDefaultLintFormat() - Method in interface com.clarkparsia.pellint.lintpattern.LintPattern
 
getDefaultLintFormat() - Method in class com.clarkparsia.pellint.lintpattern.ontology.EquivalentAndSubclassAxiomPattern
 
getDefaultLintFormat() - Method in class com.clarkparsia.pellint.lintpattern.ontology.ExistentialExplosionPattern
 
getDefaultLintFormat() - Method in class com.clarkparsia.pellint.lintpattern.ontology.TooManyDifferentIndividualsPattern
 
getDefiniteElements() - Method in class com.clarkparsia.pellint.rdfxml.DoubtfulSet
 
getDescription() - Method in class com.clarkparsia.pellint.lintpattern.axiom.EquivalentToAllValuePattern
 
getDescription() - Method in class com.clarkparsia.pellint.lintpattern.axiom.EquivalentToComplementPattern
 
getDescription() - Method in class com.clarkparsia.pellint.lintpattern.axiom.EquivalentToMaxCardinalityPattern
 
getDescription() - Method in class com.clarkparsia.pellint.lintpattern.axiom.EquivalentToTopPattern
 
getDescription() - Method in class com.clarkparsia.pellint.lintpattern.axiom.GCIPattern
 
getDescription() - Method in class com.clarkparsia.pellint.lintpattern.axiom.LargeCardinalityPattern
 
getDescription() - Method in class com.clarkparsia.pellint.lintpattern.axiom.LargeDisjunctionPattern
 
getDescription() - Method in interface com.clarkparsia.pellint.lintpattern.LintPattern
 
getDescription() - Method in class com.clarkparsia.pellint.lintpattern.ontology.EquivalentAndSubclassAxiomPattern
 
getDescription() - Method in class com.clarkparsia.pellint.lintpattern.ontology.ExistentialExplosionPattern
 
getDescription() - Method in class com.clarkparsia.pellint.lintpattern.ontology.TooManyDifferentIndividualsPattern
 
getDoubtfulAnnotaionRoles() - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
getDoubtfulClasses() - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
getDoubtfulDatatypeRoles() - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
getDoubtfulDatatypes() - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
getDoubtfulElements() - Method in class com.clarkparsia.pellint.rdfxml.DoubtfulSet
 
getDoubtfulIndividuals() - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
getDoubtfulObjectRoles() - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
getDoubtfulOntologies() - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
getDoubtfulRoles() - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
getDoubtfulSWRLVariables() - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
getEdgeMultiplicity(DefaultWeightedEdge) - Method in class com.clarkparsia.pellint.util.OptimizedDirectedMultigraph
 
getLintFixer() - Method in class com.clarkparsia.pellint.model.Lint
 
getLiteralsAsClass() - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
getLiteralsAsIndividuals() - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
getMissingStatements() - Method in class com.clarkparsia.pellint.rdfxml.RDFLints
 
getMultiTypedResources(boolean) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
Returns resources that have multiple types.
getName() - Method in class com.clarkparsia.pellint.lintpattern.axiom.EquivalentToAllValuePattern
 
getName() - Method in class com.clarkparsia.pellint.lintpattern.axiom.EquivalentToComplementPattern
 
getName() - Method in class com.clarkparsia.pellint.lintpattern.axiom.EquivalentToMaxCardinalityPattern
 
getName() - Method in class com.clarkparsia.pellint.lintpattern.axiom.EquivalentToTopPattern
 
getName() - Method in class com.clarkparsia.pellint.lintpattern.axiom.GCIPattern
 
getName() - Method in class com.clarkparsia.pellint.lintpattern.axiom.LargeCardinalityPattern
 
getName() - Method in class com.clarkparsia.pellint.lintpattern.axiom.LargeDisjunctionPattern
 
getName() - Method in interface com.clarkparsia.pellint.lintpattern.LintPattern
 
getName() - Method in class com.clarkparsia.pellint.lintpattern.ontology.EquivalentAndSubclassAxiomPattern
 
getName() - Method in class com.clarkparsia.pellint.lintpattern.ontology.ExistentialExplosionPattern
 
getName() - Method in class com.clarkparsia.pellint.lintpattern.ontology.TooManyDifferentIndividualsPattern
 
getNamespaces() - Method in class com.clarkparsia.pellint.rdfxml.RDFModel
 
getOntology() - Method in class com.clarkparsia.pellint.model.OntologyLints
 
getOntologyLintPatterns() - Method in class com.clarkparsia.pellint.lintpattern.LintPatternLoader
 
getParticipatingAxioms() - Method in class com.clarkparsia.pellint.model.Lint
 
getParticipatingClasses() - Method in class com.clarkparsia.pellint.model.Lint
 
getParticipatingOntology() - Method in class com.clarkparsia.pellint.model.Lint
 
getPattern() - Method in class com.clarkparsia.pellint.model.Lint
 
getResourcesAsLiterals() - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
getRootOntology() - Method in class com.clarkparsia.pellint.model.OntologyLints
 
getSeverity() - Method in class com.clarkparsia.pellint.model.Lint
 
getStatements() - Method in class com.clarkparsia.pellint.rdfxml.RDFModel
 
getStatementsByObject(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.RDFModel
 
getStatementsByPredicate(Property) - Method in class com.clarkparsia.pellint.rdfxml.RDFModel
 
getUniqueObject(Resource, Property) - Method in class com.clarkparsia.pellint.rdfxml.RDFModel
 
getValues(Resource, Property) - Method in class com.clarkparsia.pellint.rdfxml.RDFModel
 

H

hashCode() - Method in class com.clarkparsia.pellint.model.Severity
 

I

IllegalPellintArgumentException - Exception in com.clarkparsia.pellint.util
Title:
IllegalPellintArgumentException() - Constructor for exception com.clarkparsia.pellint.util.IllegalPellintArgumentException
 
IllegalPellintArgumentException(String) - Constructor for exception com.clarkparsia.pellint.util.IllegalPellintArgumentException
 
isComplex(OWLClassExpression) - Static method in class com.clarkparsia.pellint.util.OWLUtil
 
isEmpty() - Method in class com.clarkparsia.pellint.model.OntologyLints
 
isEmpty() - Method in class com.clarkparsia.pellint.rdfxml.RDFLints
 
isExcludeValidPunnings() - Method in class com.clarkparsia.pellint.rdfxml.OWLSyntaxChecker
Returns if valid punninga will be excluded from lint report.
isFixable() - Method in class com.clarkparsia.pellint.lintpattern.axiom.EquivalentToAllValuePattern
 
isFixable() - Method in class com.clarkparsia.pellint.lintpattern.axiom.EquivalentToComplementPattern
 
isFixable() - Method in class com.clarkparsia.pellint.lintpattern.axiom.EquivalentToMaxCardinalityPattern
 
isFixable() - Method in class com.clarkparsia.pellint.lintpattern.axiom.EquivalentToTopPattern
 
isFixable() - Method in class com.clarkparsia.pellint.lintpattern.axiom.GCIPattern
 
isFixable() - Method in class com.clarkparsia.pellint.lintpattern.axiom.LargeCardinalityPattern
 
isFixable() - Method in class com.clarkparsia.pellint.lintpattern.axiom.LargeDisjunctionPattern
 
isFixable() - Method in interface com.clarkparsia.pellint.lintpattern.LintPattern
Returns true if this pattern provides an automatic fix for every Lint it matches.
isFixable() - Method in class com.clarkparsia.pellint.lintpattern.ontology.EquivalentAndSubclassAxiomPattern
 
isFixable() - Method in class com.clarkparsia.pellint.lintpattern.ontology.ExistentialExplosionPattern
 
isFixable() - Method in class com.clarkparsia.pellint.lintpattern.ontology.TooManyDifferentIndividualsPattern
 

L

LargeCardinalityPattern - Class in com.clarkparsia.pellint.lintpattern.axiom
Title:
LargeCardinalityPattern() - Constructor for class com.clarkparsia.pellint.lintpattern.axiom.LargeCardinalityPattern
 
LargeDisjunctionPattern - Class in com.clarkparsia.pellint.lintpattern.axiom
Title:
LargeDisjunctionPattern() - Constructor for class com.clarkparsia.pellint.lintpattern.axiom.LargeDisjunctionPattern
 
Lint - Class in com.clarkparsia.pellint.model
Title: Lint
Lint(LintPattern, OWLOntology) - Constructor for class com.clarkparsia.pellint.model.Lint
 
LintFactory - Class in com.clarkparsia.pellint.model
Title:
LintFactory(LintPattern, OWLOntology) - Constructor for class com.clarkparsia.pellint.model.LintFactory
 
LintFixer - Class in com.clarkparsia.pellint.model
Title: Lint Fixer
LintFixer(Set<? extends OWLAxiom>, Set<? extends OWLAxiom>) - Constructor for class com.clarkparsia.pellint.model.LintFixer
 
LintFixer(OWLAxiom, OWLAxiom) - Constructor for class com.clarkparsia.pellint.model.LintFixer
 
LintFormat - Interface in com.clarkparsia.pellint.format
Title: Lint String Formatting Interface
LintPattern - Interface in com.clarkparsia.pellint.lintpattern
Title: Lint Pattern Interface
LintPatternLoader - Class in com.clarkparsia.pellint.lintpattern
Title: Lint Pattern Loader
LintPatternLoader() - Constructor for class com.clarkparsia.pellint.lintpattern.LintPatternLoader
 
LintPatternLoader(Properties) - Constructor for class com.clarkparsia.pellint.lintpattern.LintPatternLoader
 
log - Static variable in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 

M

make() - Method in class com.clarkparsia.pellint.model.LintFactory
 
makeLint() - Method in class com.clarkparsia.pellint.lintpattern.axiom.AxiomLintPattern
 
makeList() - Static method in class com.clarkparsia.pellint.util.CollectionUtil
 
makeMap() - Static method in class com.clarkparsia.pellint.util.CollectionUtil
 
makeSet() - Static method in class com.clarkparsia.pellint.util.CollectionUtil
 
match(OWLOntology, OWLAxiom) - Method in class com.clarkparsia.pellint.lintpattern.axiom.AxiomLintPattern
Match an OWLAxiom and returns a Lint for the axiom if found.
match(OWLOntology) - Method in class com.clarkparsia.pellint.lintpattern.ontology.EquivalentAndSubclassAxiomPattern
 
match(OWLOntology) - Method in class com.clarkparsia.pellint.lintpattern.ontology.ExistentialExplosionPattern
 
match(OWLOntology) - Method in interface com.clarkparsia.pellint.lintpattern.ontology.OntologyLintPattern
Match an OWLOntology and returns a list of Lint for the OWLOntology.
match(OWLOntology) - Method in class com.clarkparsia.pellint.lintpattern.ontology.TooManyDifferentIndividualsPattern
 

O

OntologyLintPattern - Interface in com.clarkparsia.pellint.lintpattern.ontology
Title: Ontology-based Lint Pattern Interface
OntologyLints - Class in com.clarkparsia.pellint.model
Title: Ontology Lints
OntologyLints(OWLOntology) - Constructor for class com.clarkparsia.pellint.model.OntologyLints
 
OptimizedDirectedMultigraph<V> - Class in com.clarkparsia.pellint.util
Title: Optimized Directed Multigraph
OptimizedDirectedMultigraph() - Constructor for class com.clarkparsia.pellint.util.OptimizedDirectedMultigraph
 
OWLDeepEntityVisitorAdapter - Class in com.clarkparsia.pellint.util
Title: OWL Deep-Entity-Visitor Adapter
OWLDeepEntityVisitorAdapter() - Constructor for class com.clarkparsia.pellint.util.OWLDeepEntityVisitorAdapter
 
OWLEntityDatabase - Class in com.clarkparsia.pellint.rdfxml
Title:
OWLEntityDatabase() - Constructor for class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
OWLSyntaxChecker - Class in com.clarkparsia.pellint.rdfxml
Title:
OWLSyntaxChecker() - Constructor for class com.clarkparsia.pellint.rdfxml.OWLSyntaxChecker
 
OWLUtil - Class in com.clarkparsia.pellint.util
Title:
OWLUtil() - Constructor for class com.clarkparsia.pellint.util.OWLUtil
 

R

RDFLints - Class in com.clarkparsia.pellint.rdfxml
Title:
RDFLints() - Constructor for class com.clarkparsia.pellint.rdfxml.RDFLints
 
RDFModel - Class in com.clarkparsia.pellint.rdfxml
Title:
RDFModel() - Constructor for class com.clarkparsia.pellint.rdfxml.RDFModel
 
RDFModelReader - Class in com.clarkparsia.pellint.rdfxml
Title:
RDFModelReader() - Constructor for class com.clarkparsia.pellint.rdfxml.RDFModelReader
 
RDFModelWriter - Class in com.clarkparsia.pellint.rdfxml
Title:
RDFModelWriter() - Constructor for class com.clarkparsia.pellint.rdfxml.RDFModelWriter
 
read(String, boolean) - Method in class com.clarkparsia.pellint.rdfxml.RDFModelReader
 
remove(Object) - Method in class com.clarkparsia.pellint.rdfxml.DoubtfulSet
 

S

setExcludeValidPunnings(boolean) - Method in class com.clarkparsia.pellint.rdfxml.OWLSyntaxChecker
Sets if valid punninga will be excluded from lint report.
setLint(Lint) - Method in class com.clarkparsia.pellint.lintpattern.axiom.AxiomLintPattern
 
setLintFixer(LintFixer) - Method in class com.clarkparsia.pellint.model.Lint
 
setMaxAllowed(int) - Method in class com.clarkparsia.pellint.lintpattern.axiom.LargeCardinalityPattern
 
setMaxAllowed(int) - Method in class com.clarkparsia.pellint.lintpattern.axiom.LargeDisjunctionPattern
 
setMaxAllowed(int) - Method in class com.clarkparsia.pellint.lintpattern.ontology.TooManyDifferentIndividualsPattern
 
setMaxTreeSize(int) - Method in class com.clarkparsia.pellint.lintpattern.ontology.ExistentialExplosionPattern
 
setRootOntology(OWLOntology) - Method in class com.clarkparsia.pellint.model.OntologyLints
 
setSeverity(Severity) - Method in class com.clarkparsia.pellint.model.Lint
 
Severity - Class in com.clarkparsia.pellint.model
Title: Severity
Severity(double) - Constructor for class com.clarkparsia.pellint.model.Severity
 
SimpleLintFormat - Class in com.clarkparsia.pellint.format
Title: Simple Lint Format
SimpleLintFormat() - Constructor for class com.clarkparsia.pellint.format.SimpleLintFormat
 
size() - Method in class com.clarkparsia.pellint.model.OntologyLints
 
sort(Comparator<? super Lint>) - Method in class com.clarkparsia.pellint.model.OntologyLints
 

T

TooManyDifferentIndividualsPattern - Class in com.clarkparsia.pellint.lintpattern.ontology
Title:
TooManyDifferentIndividualsPattern() - Constructor for class com.clarkparsia.pellint.lintpattern.ontology.TooManyDifferentIndividualsPattern
 
toString() - Method in class com.clarkparsia.pellint.model.Lint
It is recommended to use LintFormat.format() instead of calling toString() directly on a Lint.
toString() - Method in class com.clarkparsia.pellint.model.OntologyLints
 
toString() - Method in class com.clarkparsia.pellint.model.Severity
 
toString() - Method in class com.clarkparsia.pellint.rdfxml.RDFLints
 

V

validate(RDFModel) - Method in class com.clarkparsia.pellint.rdfxml.OWLSyntaxChecker
 
visit(OWLEquivalentClassesAxiom) - Method in class com.clarkparsia.pellint.lintpattern.axiom.EquivalentToAllValuePattern
 
visit(OWLEquivalentClassesAxiom) - Method in class com.clarkparsia.pellint.lintpattern.axiom.EquivalentToComplementPattern
 
visit(OWLEquivalentClassesAxiom) - Method in class com.clarkparsia.pellint.lintpattern.axiom.EquivalentToMaxCardinalityPattern
 
visit(OWLEquivalentClassesAxiom) - Method in class com.clarkparsia.pellint.lintpattern.axiom.EquivalentToTopPattern
 
visit(OWLEquivalentClassesAxiom) - Method in class com.clarkparsia.pellint.lintpattern.axiom.GCIPattern
 
visit(OWLSubClassOfAxiom) - Method in class com.clarkparsia.pellint.lintpattern.axiom.GCIPattern
 
visit(OWLDisjointClassesAxiom) - Method in class com.clarkparsia.pellint.lintpattern.axiom.LargeCardinalityPattern
 
visit(OWLDisjointUnionAxiom) - Method in class com.clarkparsia.pellint.lintpattern.axiom.LargeCardinalityPattern
 
visit(OWLEquivalentClassesAxiom) - Method in class com.clarkparsia.pellint.lintpattern.axiom.LargeCardinalityPattern
 
visit(OWLSubClassOfAxiom) - Method in class com.clarkparsia.pellint.lintpattern.axiom.LargeCardinalityPattern
 
visit(OWLDisjointClassesAxiom) - Method in class com.clarkparsia.pellint.lintpattern.axiom.LargeDisjunctionPattern
 
visit(OWLDisjointUnionAxiom) - Method in class com.clarkparsia.pellint.lintpattern.axiom.LargeDisjunctionPattern
 
visit(OWLEquivalentClassesAxiom) - Method in class com.clarkparsia.pellint.lintpattern.axiom.LargeDisjunctionPattern
 
visit(OWLSubClassOfAxiom) - Method in class com.clarkparsia.pellint.lintpattern.axiom.LargeDisjunctionPattern
 
visit(OWLClass) - Method in class com.clarkparsia.pellint.util.OWLDeepEntityVisitorAdapter
 
visit(OWLObjectProperty) - Method in class com.clarkparsia.pellint.util.OWLDeepEntityVisitorAdapter
 
visit(OWLDataProperty) - Method in class com.clarkparsia.pellint.util.OWLDeepEntityVisitorAdapter
 
visit(OWLIndividual) - Method in class com.clarkparsia.pellint.util.OWLDeepEntityVisitorAdapter
 
visit(OWLDatatype) - Method in class com.clarkparsia.pellint.util.OWLDeepEntityVisitorAdapter
 

W

write(OutputStream, RDFModel) - Method in class com.clarkparsia.pellint.rdfxml.RDFModelWriter
 
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